rs8179797 chr2:24164564 C>T
- Sequence
cgatgagggtgccccctggtggag[C/T]cacacgatgagggtgccccctggt
- ASB in cell types
- K562 (myelogenous leukemia) PC9 (lung adenocarcinoma) bipolar neuron GM23338
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.85 | -0.41 | 1.50 | 0.00 | Weak Discordant |
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Motif analysis
