rs8180759 chr7:70713166 T>G
- Sequence
aaccgcttctgaaagacaaactgt[T/G]ccatcgagttccttcttggcaggt
- ASB in cell types
- T47D (invasive ductal carcinoma) LNCaP C4-2 (prostate carcinoma) A1-2 (breast cancer cells) LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN PRGR_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.40 | 0.15 | 1.53 | -1.22 | Weak Concordant | |||
| PRGR_HUMAN | 0.90 | 0.43 | 1.19 | -1.06 | Weak Concordant |
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Motif analysis
