rs818182 chr2:10487418 G>A
- Sequence
gccatcagattaggggctttgaaa[G/A]gtcaaggggagaatgatgctgtgg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant) breast tumor xenograft MCF7 WS8 cells
- ASB for transcription factors
- FOXA1_HUMAN ESR1_HUMAN ERR1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.10 | 0.32 | 1.50 | n/a | No Hit | |||
| ESR1_HUMAN | 1.15 | 0.07 | 1.67 | -3.92 | Concordant | |||
| ERR1_HUMAN | 2.39 | -0.85 | 1.38 | -3.86 | Concordant |
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Motif analysis
