rs8187753 chr15:84895166 A>C

Sequence
ccgaggcagggcaggggagggccc[A/C]tgagctgaggggttggctccaggg
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
ESR1_HUMAN ZN574_HUMAN ZN579_HUMAN NDF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 0.00 1.38 1.001.1·10-4 1.75 n/a No Hit
ZN574_HUMAN -2.88 3.05 1.001.4·10-3 1.00 n/a No Hit
ZN579_HUMAN -2.76 2.85 1.000.01 1.00 n/a n/a
NDF1_HUMAN -2.66 2.57 1.000.01 1.00 n/a No Hit
ZN217_HUMAN -1.73 1.96 1.000.02 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP mitral annular calcium triglycerides
GTEx eQTL Adipose_Subcutaneous Artery_Aorta Artery_Tibial Cells_Cultured_fibroblasts Colon_Sigmoid Esophagus_Mucosa Heart_Left_Ventricle Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Thyroid

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