rs8190880 chr8:30728080 G>T
- Sequence
tggatcccgagcggcgcctgccgc[G/T]tgtagccttctgaagtccggtgga
- ASB in cell types
- GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.93 | 2.46 | 1.00 | 1.16 | Weak Concordant |
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Motif analysis
