rs8191518 chr8:11769752 C>G
- Sequence
ggagcggctgtgcgggctgcgtag[C/G]ggtgctgggtcgggccgacgtgcc
- ASB in cell types
- breast tumor BEAS-2B (bronchial epithelium) 22RV1 (prostate carcinoma) naive IgD+ B cells
- ASB for transcription factors
- GCR_HUMAN ANDR_HUMAN ZFX_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 0.05 | 1.22 | 1.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.39 | -0.68 | 2.00 | n/a | No Hit | |||
| ZFX_HUMAN | 1.81 | -0.55 | 1.25 | n/a | No Hit | |||
| CREB1_HUMAN | 1.45 | -1.28 | 1.00 | n/a | No Hit | |||
| FOXP1_HUMAN | 2.48 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Artery_Coronary, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Muscle_Skeletal, Nerve_Tibial, Ovary, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid