rs821434 chr1:153336832 A>C
- Sequence
tcactgtggctttggcatataagg[A/C]aaagtgtctctacattgttgtcat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- SRF_HUMAN BMI1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRF_HUMAN | -2.02 | 2.32 | 1.00 | -0.41 | Weak Discordant | |||
| BMI1_HUMAN | -1.18 | 1.18 | 1.00 | n/a | n/a |
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Motif analysis
