rs822779 chr3:22947964 C>T

Sequence
ccttagaagaacattacgtggaac[C/T]acagactcatggaacacattgctc
ASB in cell types
22RV1 (prostate carcinoma) LNCaP95

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) 1.83 -4.50 4.9·10-31.00 2.00
LNCaP95 -0.00 1.68 0.970.02 1.50
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels homa-b ldl cholesterol lp-pla2 activity obesity with early age of onset (age >2) rheumatoid arthritis simpson-angus scale
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic

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