ADASTRA v6.1.1
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rs822779
chr3:22947964
C
>
T
Sequence
ccttagaagaacattacgtggaac[C/T]acagactcatggaacacattgctc
ASB in cell types
22RV1 (prostate carcinoma)
LNCaP95
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma)
1.83
-4.50
4.9·10
-3
1.00
2.00
LNCaP95
-0.00
1.68
0.97
0.02
1.50
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
homa-b
,
ldl cholesterol
,
lp-pla2 activity
,
obesity with early age of onset (age >2)
,
rheumatoid arthritis
,
simpson-angus scale
GTEx eQTL
Skin_Not_Sun_Exposed_Suprapubic
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Generated by ADASTRA database
2025.04.22 v6.1.1 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
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