rs829183 chr3:14774745 T>C
- Sequence
tgtccagggctgcagaatcaaatg[T/C]accttagggaggagggagaaaagg
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.29 | 2.93 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP childhood acute lymphoblastic leukemia, hdl cholesterol change with statins, ldl cholesterol, mitral annular calcium, refractive error, triglycerides, variant creutzfeldt-jakob disease