rs829895 chr12:98466235 T>C

Sequence
gggatttattaagttttctctcca[T/C]agagacaaccaaggatggtaaggt
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
SMCA4_HUMAN SMRC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN -2.52 2.28 1.004.4·10-3 1.00 n/a n/a
SMRC1_HUMAN -1.49 1.88 1.000.01 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP refractive error
GTEx eQTL Adrenal_Gland Brain_Nucleus_accumbens_basal_ganglia Heart_Atrial_Appendage Heart_Left_Ventricle Nerve_Tibial Ovary Pancreas Pituitary Testis Thyroid

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