rs835044 chr12:95003776 T>C
- Sequence
aggaagcccacgcccagaaggttc[T/C]cacgcgaacgccagacgtggtggc
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line) fetal bone marrow-derived mononuclear cells MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- ARNT_HUMAN SP7_HUMAN ZXDB_HUMAN ZFHX2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARNT_HUMAN | 3.31 | 0.59 | 1.62 | n/a | No Hit | |||
| SP7_HUMAN | n/a | 3.43 | 2.00 | n/a | No Hit | |||
| ZXDB_HUMAN | n/a | 3.63 | 2.00 | n/a | n/a | |||
| ZFHX2_HUMAN | n/a | 1.84 | 2.00 | n/a | n/a | |||
| CDK9_HUMAN | 0.43 | 1.72 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Testis, Thyroid, Whole_Blood