rs838492 chr12:124681620 A>G
- Sequence
acactatgacagtctgtgagcccc[A/G]tagaagtgggggtgggggctggcc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) ID00014 (lymphoblastoid cell, DiGeorge syndrome) CD14+ monocytes HL-60 (acute myeloid leukemia)
- ASB for transcription factors
- ESR1_HUMAN CTCF_HUMAN STAT1_HUMAN SKI_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.57 | 0.03 | 1.52 | n/a | No Hit | |||
| CTCF_HUMAN | 2.00 | 0.16 | 2.01 | n/a | No Hit | |||
| STAT1_HUMAN | 2.13 | -1.08 | 2.00 | n/a | No Hit | |||
| SKI_HUMAN | 3.58 | n/a | 2.00 | n/a | n/a | |||
| NOTC1_HUMAN | 2.07 | n/a | 2.00 | n/a | n/a |
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