rs841850 chr1:42936383 T>C
- Sequence
gttggggctggccccacactgccc[T/C]tcccacaagctctcagcccagggc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NCOR1_HUMAN PRD10_HUMAN ZEB2_HUMAN REST_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NCOR1_HUMAN | -1.88 | 1.97 | 1.33 | n/a | n/a | |||
| PRD10_HUMAN | -1.98 | 2.26 | 1.00 | n/a | n/a | |||
| ZEB2_HUMAN | -1.21 | 1.20 | 1.00 | n/a | No Hit | |||
| REST_HUMAN | -1.69 | 1.69 | 1.00 | n/a | No Hit | |||
| PKNX1_HUMAN | -2.06 | 2.44 | 1.00 | 1.88 | Weak Concordant |
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Motif analysis
