rs842406 chr13:46656059 C>T
- Sequence
ttctctgcagcctggcattctttt[C/T]ggctgctgaacaatgtgcagaaag
- ASB in cell types
- 22RV1 (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| 22RV1 (prostate carcinoma) | -1.89 | 2.84 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, height, infant head circumference, mitral annular calcium, serum creatinine, total cholesterol
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Testis, Whole_Blood