rs842650 chr2:60881861 A>T
- Sequence
agccatggcctccggtgagtgttc[A/T]tggggcgcgggcctgggccggggg
- ASB in cell types
- breast tumor BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- ESR1_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 3.04 | n/a | 1.75 | n/a | No Hit | |||
| GCR_HUMAN | 0.49 | 1.11 | 1.00 | 3.18 | Concordant |
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Motif analysis
