rs844543 chr3:196712392 G>A

Sequence
gctgcaggcagctgggaaccgcgg[G/A]cgctaggcgcgcgcacccagcact
ASB in cell types
breast tumor IMR-5 (Neuroblastoma)
ASB for transcription factors
ESR1_HUMAN RAD21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 3.29 n/a 3.3·10-41.00 2.00 n/a No Hit
RAD21_HUMAN 2.17 -2.16 0.031.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Cortex Esophagus_Mucosa

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