rs8453 chr1:114716978 G>T
- Sequence
ttctttcgccattaacagaaaact[G/T]gagaaagcaaaaatgtttcgtgtt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN ZBT40_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 3.03 | -5.54 | 2.00 | -0.73 | Weak Concordant | |||
| ZBT40_HUMAN | 0.66 | n/a | 6.00 | 2.88 | Discordant | |||
| ESR1_HUMAN | 1.29 | -0.03 | 3.33 | n/a | No Hit |
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Motif analysis
