rs847688 chr17:50151620 T>C

Sequence
ccccttggaggtgtgaaaccttgg[T/C]ccagcgctggtgacctttcgatgg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
COT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
COT1_HUMAN -1.02 1.02 1.000.03 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP salmonella-induced pyroptosis
GTEx eQTL Artery_Aorta Brain_Cerebellar_Hemisphere Brain_Cerebellum Cells_Cultured_fibroblasts Cells_EBV-transformed_lymphocytes Esophagus_Muscularis Lung Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Testis Thyroid Whole_Blood

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