rs848189 chr1:15951152 C>T
- Sequence
ccagaagtgggctcctcccacaca[C/T]gggtgttaggaggagaaacagagg
- ASB in cell types
- activated primary CD4+ T cells from blood
- ASB for transcription factors
- NFAC2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFAC2_HUMAN | 1.11 | -3.69 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP diastolic blood pressure (dbp), hdl cholesterol, hypertension (early onset hypertension), schizophrenia, serum creatinine, systolic blood pressure (sbp), triglycerides, zbtb17 cis-gene expression in monocytes-derived macrophages
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Brain_Cortex, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Pituitary, Spleen, Thyroid