rs848552 chr2:36473437 C>G
- Sequence
tgttttcagtgtatgctcagagtt[C/G]tgcaatcatcaacacaatcagttt
- ASB in cell types
- SUM159PT (Triple negative breast cancer) MSC (mesenchymal stem cells) MOLM-13(acute monocytic leukemia(AML), Homo sapiens)
- ASB for transcription factors
- CEBPB_HUMAN CEBPA_HUMAN TF65_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 0.17 | 2.46 | 1.70 | 4.98 | Concordant | |||
| CEBPA_HUMAN | -5.17 | 3.19 | 1.50 | 6.72 | Concordant | |||
| TF65_HUMAN | n/a | 2.13 | 3.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
