ADASTRA v6.1.0
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rs849057
chr6:6505173
C
>
T
Sequence
atagggccaggcaggattggactt[C/T]acctcctcaggagacctgttggct
ASB in cell types
MS-1 (Small cell lung carcinoma)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MS-1 (Small cell lung carcinoma)
-1.49
1.42
1.00
6.5·10
-4
1.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
diastolic blood pressure (dbp)
,
hdl cholesterol
,
mitral annular calcium
,
prop taste detection threshold
GTEx eQTL
Colon_Transverse
,
Esophagus_Muscularis
,
Lung
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Generated by ADASTRA database
2024.11.16 v6.1.0 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale