rs852425 chr7:5527040 A>G

Sequence
tctccacacacctgcactctgggt[A/G]aggacaagttggcccccactgccc
ASB in cell types
A549 (lung carcinoma) HeLa (cervical adenocarcinoma) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
AFF4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
AFF4_HUMAN -3.17 1.99 1.000.01 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP asthma birth weight body mass index (bmi) eye color total cholesterol triglycerides
GTEx eQTL Artery_Aorta Esophagus_Mucosa Testis

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