rs852535 chr7:5556040 C>T
- Sequence
ctgcagtgagacttagacataagg[C/T]acaccatcaagcaaacaccgggtg
- ASB in cell types
- 22RV1 (prostate carcinoma) primary B-CLL cells CD14+ monocytes
- ASB for transcription factors
- ANDR_HUMAN STAT1_HUMAN BRD4_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.94 | -1.55 | 2.00 | 6.59 | Discordant | |||
| STAT1_HUMAN | 2.28 | -1.51 | 2.00 | n/a | No Hit | |||
| BRD4_HUMAN | 2.07 | 0.26 | 1.44 | n/a | n/a | |||
| CTCF_HUMAN | 0.07 | 1.30 | 1.08 | n/a | No Hit |
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Motif analysis
