rs854562 chr7:95318657 C>T
- Sequence
tctctagggctctgtgtactttgg[C/T]aggaacaggagcaatttcatcagt
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma) LNCaP C4-2 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.30 | 0.30 | 1.62 | -1.05 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adrenal_Gland, Esophagus_Mucosa, Liver, Ovary, Pancreas, Prostate, Skin_Sun_Exposed_Lower_leg, Testis