rs855459 chr9:33719737 T>C
- Sequence
ctccgggcaagcagcccctcatgg[T/C]ccatggtggaactgcaccctcagc
- ASB in cell types
- SYO-1(Biphasic synovial sarcoma) GM17942 (lymphoblastoid cell)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.90 | 2.26 | 1.33 | 0.44 | Weak Discordant |
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Motif analysis
