rs855663 chr7:149761039 T>C
- Sequence
cttgtgacaaatgaatatgtccca[T/C]ctccctcacaaacaagaattcggg
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | -0.18 | 0.59 | 1.48 |
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Motif analysis
No data available
Genetic associations
GRASP college completion, hdl cholesterol, ldl cholesterol, maternal transmission distortion, obesity with early age of onset (age >2), serum creatinine, stabilized warfarin dose, transmission distortion, triglycerides, years of education
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cortex, Brain_Frontal_Cortex_BA9, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood