rs857416 chr6:14658920 C>T

Sequence
ttctcttctcctcaacacacagag[C/T]ttaaccctccccagactctctagg
ASB in cell types
BEAS-2B (bronchial epithelium)
ASB for transcription factors
GCR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 1.94 0.79 3.2·10-31.00 1.00 3.19 Discordant
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Motif analysis

GCR_HUMAN Discordant
GCR_HUMAN pic

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence,  ldl cholesterol,  urinary albumin-to-creatinine ratio

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