rs857591 chr1:186288386 G>T
- Sequence
cctctaccaggtataagatagttg[G/T]ttatgtgcaagctgtgtcatctat
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- NFIC_HUMAN ATF3_HUMAN NCOR1_HUMAN ZN316_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | 2.27 | n/a | 3.00 | -3.22 | Concordant | |||
| ATF3_HUMAN | 3.11 | n/a | 3.00 | n/a | No Hit | |||
| NCOR1_HUMAN | 1.53 | n/a | 3.00 | n/a | n/a | |||
| ZN316_HUMAN | 2.94 | n/a | 3.00 | n/a | No Hit | |||
| ARI1B_HUMAN | 0.97 | n/a | 3.00 | n/a | n/a |
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Motif analysis
