rs858247 chr7:23181664 C>A
- Sequence
ttctcagcccaagctaagttttac[C/A]gtctcagcaagaacgactcagtct
- ASB in cell types
- GM02630 (Fanconi anemi)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.97 | -1.71 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | n/a | 2.19 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Coronary, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Muscularis, Lung, Nerve_Tibial, Spleen, Stomach, Thyroid, Whole_Blood