rs865726 chr3:58033152 C>T

Sequence
caatgaagaacacattttgattag[C/T]ttatacacacactcctgtgtacac
ASB in cell types
iPSC (induced pluripotent stem cells)
ASB for transcription factors
DUX4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
DUX4_HUMAN -1.70 1.87 1.002.0·10-3 1.00 1.06 Weak Concordant
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Motif analysis

DUX4_HUMAN Weak Concordant
DUX4_HUMAN pic

Genetic associations

GRASP barnes akathisia rating scale,  height,  ldl cholesterol change with statins,  total cholesterol,  total cholesterol change with statins
GTEx eQTL Brain_Cerebellar_Hemisphere,  Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Lung

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