rs868521 chr13:113992855 G>A

Sequence
caacctctgcttcagttaccattg[G/A]cctatttggacacgtggcaaaaga
ASB for transcription factors
PPARG_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PPARG_HUMAN -5.34 1.89 1.000.02 2.50 0.51 Weak Concordant
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Motif analysis

PPARG_HUMAN Weak Concordant
PPARG_HUMAN pic

Genetic associations

GRASP height,  microalbuminuria
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Cortex,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Stomach,  Testis,  Thyroid,  Whole_Blood

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