rs869261 chr20:56550898 A>G

Sequence
aacaattgtgtaagttgaagtaat[A/G]gaatgtttctaaatgactaatagc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma) AG04450 (fibroblasts)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma) 0.54 1.07 1.002.7·10-4 3.34
AG04450 (fibroblasts) 2.17 -2.16 0.041.00 1.00
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP college completion,  parkinsons disease,  suicide attempts in bipolar disorder,  suicide attempts in bipolar disorder (males),  suicide attempts in bipolar disorder (substance abuse/dependence),  triglycerides
GTEx eQTL Testis

Download