rs869399 chr3:186108975 C>T
- Sequence
tctctcctccccttgcagcggccc[C/T]ggcggcgcaggcgcgctcacgcac
- ASB in cell types
- pancreas HepG2 (hepatoblastoma) Peyer's patch upper lobe of left lung
- ASB for transcription factors
- CTCF_HUMAN RBM25_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.16 | 1.68 | 1.14 | -2.97 | Discordant | |||
| RBM25_HUMAN | -1.47 | 3.52 | 3.00 | n/a | n/a | |||
| ANDR_HUMAN | 0.06 | 2.56 | 2.00 | n/a | No Hit |
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Motif analysis
