rs871843 chr11:122741587 C>T

Sequence
aatactccaagcctgaaatcctcg[C/T]gggtctcctggtgggaaggccgag
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 2.27 n/a 0.011.00 1.00 0.42 Weak Discordant
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Motif analysis

CTCF_HUMAN Weak Discordant
CTCF_HUMAN pic

Genetic associations

GRASP arthritis including non-rheumatoid longstanding arthritis rheumatoid arthritis

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