rs872316 chr1:53321626 G>A
- Sequence
ccaaggaggaaagttgtcaagtcg[G/A]ccaccagcagacaactggggagga
- ASB in cell types
- GM18486 (Lymphoblastoid Cell Lines) GM17942 (lymphoblastoid cell)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.92 | -0.76 | 1.00 | -0.42 | Weak Concordant |
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Motif analysis
