rs872466 chr13:44259968 C>T
- Sequence
ccagagtgatagtgaacctggtgt[C/T]tgatcctaacactggttattttta
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.04 | 1.08 | 1.08 |
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Motif analysis
No data available
Genetic associations
GRASP age at death with kuru exposure, maternal transmission distortion, prop taste detection threshold, systolic blood pressure (sbp)
GTEx eQTL Brain_Cerebellum, Breast_Mammary_Tissue, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg