rs873634 chr19:588305 A>C

Sequence
tttctgcttctcccactgccaggc[A/C]tgggcggttctcgtgccgtgcggg
ASB in cell types
foreskin keratinocyte HMEC (human mammary epithelial cells)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte 0.62 n/a 5.9·10-31.00 2.83
HMEC (human mammary epithelial cells) 1.74 -0.88 0.021.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy)
GTEx eQTL Brain_Cerebellar_Hemisphere Cells_Cultured_fibroblasts Esophagus_Mucosa Esophagus_Muscularis Lung Nerve_Tibial Testis Whole_Blood

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