rs876616 chr2:10408401 G>A
- Sequence
tctcaacaacaggtcattggcctg[G/A]agcccctccagtgggtaaaatgcc
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma) MCF7 (Invasive ductal breast carcinoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- NFIC_HUMAN E2F8_HUMAN CEBPG_HUMAN ATF7_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIC_HUMAN | n/a | 3.14 | 2.00 | -1.07 | Weak Discordant | |||
| E2F8_HUMAN | -0.01 | 2.59 | 1.33 | n/a | No Hit | |||
| CEBPG_HUMAN | -0.10 | 1.94 | 2.00 | n/a | No Hit | |||
| ATF7_HUMAN | -1.48 | 1.74 | 1.50 | n/a | No Hit | |||
| E4F1_HUMAN | n/a | 2.11 | 2.00 | n/a | No Hit |
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Motif analysis
