rs877370 chr21:38834935 A>T

Sequence
gacagaacactctgcagggttctg[A/T]atggttcattgtggcccttaggcc
ASB in cell types
HepG2 (hepatoblastoma) CWR22 (prostate carcinoma)
ASB for transcription factors
FOXA2_HUMAN ESR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN 1.83 -2.87 2.2·10-31.00 1.50 n/a No Hit
ESR1_HUMAN 2.21 -1.25 0.051.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta Testis

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