rs880088 chr16:83898746 G>C
- Sequence
gatttcggagcccaggaatcctcc[G/C]gtgcaggagttcccaggtgactct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MCF7 (Invasive ductal breast carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.47 | 1.00 | 1.08 | |||
| MCF7 (Invasive ductal breast carcinoma) | 0.07 | 0.68 | 1.86 |
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