rs880724 chr1:2908589 C>T
- Sequence
cgcctctgtactgtgcctacacca[C/T]gtgtggctccatgctccgcacagt
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | 2.31 | -1.83 | 1.17 | -2.57 | Concordant |
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Motif analysis
Genetic associations
GRASP body mass index (bmi), cystatin c in serum, eye color, fasting insulin, height, homa-b, homa-ir