rs881485 chr8:100472779 A>C
- Sequence
ccaaagtttctttacgctgttttt[A/C]tattacccacaatcctattacggc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- BHE40_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | -1.63 | 2.03 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, major depressive disorder (broad definition), major depressive disorder (broad definition) (females), major depressive disorder (broad definition) (males), transmission distortion