rs881491 chr8:100472384 G>C
- Sequence
ttccttctttaaaggctctgacct[G/C]ataaagtagcttttggccccatca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) T47D (invasive ductal carcinoma) adult erythroblasts
- ASB for transcription factors
- PRGR_HUMAN ATF7_HUMAN IKZF2_HUMAN TAL1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRGR_HUMAN | -0.58 | 1.76 | 1.12 | n/a | No Hit | |||
| ATF7_HUMAN | n/a | 2.76 | 1.50 | 3.93 | Concordant | |||
| IKZF2_HUMAN | -0.68 | 1.53 | 1.00 | n/a | n/a | |||
| TAL1_HUMAN | 2.31 | -1.62 | 1.50 | -5.27 | Concordant | |||
| SKIL_HUMAN | -1.87 | 2.19 | 1.00 | n/a | n/a |
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Motif analysis
