rs883342 chr9:129271481 A>G
- Sequence
atggcattttcctcttcttctaag[A/G]acaccactcatattggattaggcc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM12890 (Lymphoblastoid Cell Lines) GM12891 (male B- cells lymphoblastoid cell line) GM19238 (female B-cells lymphoblastoid cell lines)
- ASB for transcription factors
- CTCF_HUMAN RAD51_HUMAN COT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.09 | 0.99 | 1.07 | n/a | No Hit | |||
| RAD51_HUMAN | 3.01 | -2.88 | 1.00 | n/a | n/a | |||
| COT1_HUMAN | 2.36 | -2.38 | 1.00 | n/a | No Hit |
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