rs883343 chr9:129271451 T>C
- Sequence
catctctccactctctgcctccaa[T/C]gtcacatggcattttcctcttctt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM02630 (Fanconi anemi) GM12890 (Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN RAD51_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.32 | 1.02 | 1.06 | n/a | No Hit | |||
| STAG1_HUMAN | 0.99 | 0.23 | 1.00 | n/a | n/a | |||
| RAD51_HUMAN | 2.12 | -1.78 | 1.00 | n/a | n/a |
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