rs884073 chr15:27680350 T>A
- Sequence
aggagccactggcctctgtcggag[T/A]gaagctgccaaatgcggttgttct
- ASB in cell types
- neural cell
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -2.12 | 2.51 | 1.00 | 1.37 | Weak Concordant | |||
| RAD21_HUMAN | -1.01 | 1.84 | 1.25 | n/a | n/a |
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Motif analysis
