rs884802 chr17:74520904 T>C

Sequence
ggctccaagctcccaatggaaaca[T/C]atttgctggaaaatgcaatgccag
ASB in cell types
CD14+ monocytes monocyte-derived macrophages from peripheral blood
ASB for transcription factors
STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.59 -0.20 7.8·10-71.00 2.00 0.98 Weak Discordant
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Motif analysis

STAT1_HUMAN Weak Discordant
STAT1_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration advanced age-related macular degeneration (geographic atrophy) body mass index (bmi) tourettes syndrome years of education
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Colon_Sigmoid Lung Skin_Sun_Exposed_Lower_leg Spleen Whole_Blood

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