rs884908 chr5:175847742 C>T
- Sequence
cacacaggctccactacatggtgc[C/T]agtcacaacagagttaaccctggc
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) GM02630 (Fanconi anemi)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.59 | 1.61 | 1.50 | 0.26 | Weak Concordant | |||
| STAG1_HUMAN | -1.40 | 2.97 | 1.67 | n/a | n/a |
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Motif analysis
