rs885655 chr21:44761764 G>A
- Sequence
acggcacattctgaagaacagaga[G/A]caaagggtgagtgtgtatgtgtgt
- ASB in cell types
- RWPE2 VCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.51 | 1.21 | 1.41 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, cystatin c in serum, hdl cholesterol, height, parkinsons disease, paternal transmission distortion, transmission distortion
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Spinal_cord_cervical_c-1, Esophagus_Mucosa, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Spleen, Testis, Thyroid, Whole_Blood