rs8868 chr2:231708591 C>T
- Sequence
catccgcctccttgctcgccgcag[C/T]cgcctccgccgcgcgcctcctccg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) A549 (lung carcinoma) MOLT-4 (Adult T acute lymphoblastic leukemia) thymus-derived CD34- cells
- ASB for transcription factors
- JUN_HUMAN SPT5H_HUMAN BC11B_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 2.28 | -0.08 | 2.14 | n/a | No Hit | |||
| SPT5H_HUMAN | 1.07 | -0.42 | 1.00 | n/a | n/a | |||
| BC11B_HUMAN | 2.83 | n/a | 2.50 | n/a | n/a | |||
| STAT1_HUMAN | 2.98 | 0.80 | 1.50 | n/a | No Hit | |||
| MYCN_HUMAN | 1.89 | -1.91 | 1.00 | n/a | No Hit |
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